CDS

Accession Number TCMCG051C23209
gbkey CDS
Protein Id XP_024461621.1
Location join(6812000..6812098,6812732..6812819,6812932..6813041,6813161..6813224,6813988..6814052,6814184..6814249,6814320..6814514)
Gene LOC18101047
GeneID 18101047
Organism Populus trichocarpa

Protein

Length 228aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024605853.1
Definition rac-like GTP-binding protein RHO1 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category B
Description small GTPase mediated signal transduction
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04031        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K04392        [VIEW IN KEGG]
ko:K04513        [VIEW IN KEGG]
ko:K07857        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04010        [VIEW IN KEGG]
ko04011        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko04014        [VIEW IN KEGG]
ko04015        [VIEW IN KEGG]
ko04022        [VIEW IN KEGG]
ko04024        [VIEW IN KEGG]
ko04062        [VIEW IN KEGG]
ko04071        [VIEW IN KEGG]
ko04072        [VIEW IN KEGG]
ko04144        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
ko04150        [VIEW IN KEGG]
ko04151        [VIEW IN KEGG]
ko04270        [VIEW IN KEGG]
ko04310        [VIEW IN KEGG]
ko04350        [VIEW IN KEGG]
ko04360        [VIEW IN KEGG]
ko04370        [VIEW IN KEGG]
ko04380        [VIEW IN KEGG]
ko04510        [VIEW IN KEGG]
ko04520        [VIEW IN KEGG]
ko04530        [VIEW IN KEGG]
ko04611        [VIEW IN KEGG]
ko04620        [VIEW IN KEGG]
ko04621        [VIEW IN KEGG]
ko04650        [VIEW IN KEGG]
ko04660        [VIEW IN KEGG]
ko04662        [VIEW IN KEGG]
ko04664        [VIEW IN KEGG]
ko04666        [VIEW IN KEGG]
ko04670        [VIEW IN KEGG]
ko04722        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko04921        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko04933        [VIEW IN KEGG]
ko04972        [VIEW IN KEGG]
ko05014        [VIEW IN KEGG]
ko05100        [VIEW IN KEGG]
ko05120        [VIEW IN KEGG]
ko05130        [VIEW IN KEGG]
ko05131        [VIEW IN KEGG]
ko05132        [VIEW IN KEGG]
ko05133        [VIEW IN KEGG]
ko05152        [VIEW IN KEGG]
ko05167        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
ko05205        [VIEW IN KEGG]
ko05206        [VIEW IN KEGG]
ko05210        [VIEW IN KEGG]
ko05211        [VIEW IN KEGG]
ko05212        [VIEW IN KEGG]
ko05231        [VIEW IN KEGG]
ko05416        [VIEW IN KEGG]
ko05418        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
map04011        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map04014        [VIEW IN KEGG]
map04015        [VIEW IN KEGG]
map04022        [VIEW IN KEGG]
map04024        [VIEW IN KEGG]
map04062        [VIEW IN KEGG]
map04071        [VIEW IN KEGG]
map04072        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
map04150        [VIEW IN KEGG]
map04151        [VIEW IN KEGG]
map04270        [VIEW IN KEGG]
map04310        [VIEW IN KEGG]
map04350        [VIEW IN KEGG]
map04360        [VIEW IN KEGG]
map04370        [VIEW IN KEGG]
map04380        [VIEW IN KEGG]
map04510        [VIEW IN KEGG]
map04520        [VIEW IN KEGG]
map04530        [VIEW IN KEGG]
map04611        [VIEW IN KEGG]
map04620        [VIEW IN KEGG]
map04621        [VIEW IN KEGG]
map04650        [VIEW IN KEGG]
map04660        [VIEW IN KEGG]
map04662        [VIEW IN KEGG]
map04664        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04670        [VIEW IN KEGG]
map04722        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map04921        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map04933        [VIEW IN KEGG]
map04972        [VIEW IN KEGG]
map05014        [VIEW IN KEGG]
map05100        [VIEW IN KEGG]
map05120        [VIEW IN KEGG]
map05130        [VIEW IN KEGG]
map05131        [VIEW IN KEGG]
map05132        [VIEW IN KEGG]
map05133        [VIEW IN KEGG]
map05152        [VIEW IN KEGG]
map05167        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
map05205        [VIEW IN KEGG]
map05206        [VIEW IN KEGG]
map05210        [VIEW IN KEGG]
map05211        [VIEW IN KEGG]
map05212        [VIEW IN KEGG]
map05231        [VIEW IN KEGG]
map05416        [VIEW IN KEGG]
map05418        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0001882        [VIEW IN EMBL-EBI]
GO:0001883        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003924        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005525        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009524        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009860        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0017157        [VIEW IN EMBL-EBI]
GO:0019001        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030834        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032549        [VIEW IN EMBL-EBI]
GO:0032550        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032561        [VIEW IN EMBL-EBI]
GO:0032794        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045177        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051046        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051648        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051650        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1903530        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGCATCAAGGTTTATAAAGTGTGTGACAGTAGGAGATGGAGCTGTTGGTAAAACTTGTCTCTTGATCTCTTACACCAGCAACACCTTCCCTACGGATTATGTGCCTACAGTTTTTGACAATTTCAGCGCAAATGTGGTCGTCAATGGTGCTACTGTCAACCTGGGGTTGTGGGATACAGCTGGGCAAGAGGATTATAATAGATTAAGACCATTGAGTTACCGTGGGGCAGATGTTTTCATACTGGCATTCTCTCTCATTAGCAAGGCCAGTTATGAAAATGTTTCTAAAAAGTGGATTCCAGAGTTGAAGCATTATGCACCTGGTGTCCCAATAGTTCTTGTCGGAACAAAACTTGATCTTCGGGATGATAAGCAGTTCTTCATTGACCACCCTGGTGCTGTTCCTATTACTACAGCTCAGGGAGAGGAGCTGAGGAAGCTGATTGGTGCACCTGCCTACATTGAATGCAGTTCGAAAACACAGCAGCTTGTTCATGCAGAATGTGAAGGCAGTTTTCGATGCAGCCATCAGAGTCGTCCTTCAACCACCCAAACAAAAGAAAAAGAAGAGCAAAGCACAAAAGGCCTGTTCTATATTGTGATTGTAACAGGTGTGAGGAGCCTTGGTGTTACCCATGTTCCTTTCCTCTCTTCCCATTGCTCTCTAAGAAGCTTAATTTAA
Protein:  
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQLVHAECEGSFRCSHQSRPSTTQTKEKEEQSTKGLFYIVIVTGVRSLGVTHVPFLSSHCSLRSLI